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Hanging and NaN output when using covariates.

Status: Open.

#23 In smithlabcode/piranha;

· mfurla opened on Nov 19, 2025

installation failed

Status: Open.

#22 In smithlabcode/piranha;

· santataRU opened on Nov 15, 2024

ERROR: failed loading covariate from bed files. Reason: expected 705191340 regions, but found 656210334

Status: Open.

#21 In smithlabcode/piranha;

· Xing-2024 opened on Jun 26, 2024

ERROR while installing Piranha

Status: Open.

#20 In smithlabcode/piranha;

· usertiste opened on May 7, 2024

GSL Linking Problem For Piranha Setup

Status: Open.

#19 In smithlabcode/piranha;

· reformist opened on Apr 9, 2024

p-value is non-finite

Status: Open.

#18 In smithlabcode/piranha;

· xmkrohannon opened on Jul 31, 2022

Inconsistent results depending on whether SEQ and QUAL fields are set

Status: Open.

#17 In smithlabcode/piranha;

· marc-jones opened on Sep 30, 2021

ERROR: evaluating ZTNB PDF value at 0.0191103 failed. Reason: 0.0191103 is not a non-negative integer

Status: Open.

#16 In smithlabcode/piranha;

· Sanat-Mishra opened on Jul 13, 2021

no rule to make target in make all

Status: Open.

#15 In smithlabcode/piranha;

· ulloaa opened on May 24, 2021

Make all fails with error: No such file or directory #include <gsl/gsl_rng.h>

Status: Open.

#12 In smithlabcode/piranha;

· Samashoon opened on Apr 27, 2020

How can I understand the result

Status: Open.

#11 In smithlabcode/piranha;

· U201412486 opened on Feb 15, 2020

Can Piranha automatically infer strand when handling paired-end stranded data?

Status: Open.

#10 In smithlabcode/piranha;

· hepcat72 opened on Oct 11, 2019