Assertion failure...

[pjuren]

Zagros crashes with an assertion failure with the following command line:

zagros -c human/hg19/chromFa min_reproducible.bed

where the contents of min_reproducible.bed is the following single line:

chrM    0   16600   X   1026.48 +   1.56762e-15

Resultant error message is

zagros: ../rbp_common/IO.cpp:575: void extract_regions_chrom_fasta(const std::string&, const 
std::string&, const std::vector<GenomicRegion, std::allocator<GenomicRegion> >&, 
std::vector<std::basic_string<char, std::char_traits<char>, std::allocator<char> >, 
std::allocator<std::basic_string<char, std::char_traits<char>, std::allocator<char> > > >&, 
std::vector<std::basic_string<char, std::char_traits<char>, std::allocator<char> >, 
std::allocator<std::basic_string<char, std::char_traits<char>, std::allocator<char> > > >&): Assertion `i-
>get_width() == sequences.back().length()' failed.
Aborted

Possibly due to exceeding the length of the chromosome? ChrM has length 16571, so this region is more than the whole chromosome...