Skip to content

Malloc error when using extra tags in fastq header #70

@lucacozzuto

Description

@lucacozzuto

Dear developers,
I got this error when using falco on a single fastq sequence with extra tags in the header. Example:

@794098d5-67f5-4d93-a3a5-a19d3bf4e2d4	MN:i:1119
[running falco|                                                   |  0%]malloc(): invalid size (unsorted)
/nfs/scratch01/bi/mop4/27/f873aa32cd2be99c05869c27783d9e/.command.sh: line 4:    16 Aborted                 (core dumped)

Once I remove the extra tags it goes fine.

Best,
Luca

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Type

    No type

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions