Adding (constant) pseudocount (of 1/256.0) to all methylation level values to push methylation levels away from 0.0 and 1.0 #88
Workflow file for this run
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| name: DNMTools build (Ubuntu) | |
| on: | |
| workflow_dispatch: | |
| push: | |
| branches: [ "master" ] | |
| pull_request: | |
| branches: [ "master" ] | |
| jobs: | |
| build-with-gcc: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| submodules: recursive | |
| - name: Install dependencies | |
| run: sudo apt-get install -y libhts-dev libgsl-dev | |
| - name: Generate configure script | |
| run: ./autogen.sh | |
| - name: Configure for GCC | |
| run: ./configure CXX="g++" | |
| - name: Build with g++ | |
| run: make -j4 | |
| - name: Test the g++ build | |
| run: make -j4 check-TESTS | |
| build-with-clang: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| submodules: recursive | |
| - name: Install dependencies | |
| run: sudo apt-get install -y libhts-dev libgsl-dev | |
| - name: Generate configure script | |
| run: ./autogen.sh | |
| - name: Configure for Clang | |
| run: ./configure CXX="clang++" | |
| - name: Build with clang++ | |
| run: make -j4 | |
| - name: Test the clang++ build | |
| run: make -j4 check-TESTS |